RNA-Seq of tissues from Mouse eye and retina samples

SRP080001

Mus musculus

9 Downloadable Samples

Illumina Genome Analyzer IIx

Submitter Supplied Information

Description

We report RNA-Seq experiments of eye and retinal tissues from WT and RHO KO mice Overall design: Examine ocular tissue from different mouse genotypes

PubMed ID

28172828

Publication Title

Transcriptome analysis reveals rod/cone photoreceptor specific signatures across mammalian retinas.

Total Samples

Submitter’s Institution

No associated institution

Authors

Mustafi D, Kevany BM, Bai X, Golczak M, Adams MD, Wynshaw-Boris A, Palczewski K

Source Repository

Sequence Read Archive (SRA)

SRR3957210

WT Mouse retina bio replicate 1-tech replicate 1

retina

c57bl6/j

retina tissue-wt1

SRR3957212

WT Mouse retina bio replicate 2-tech replicate 1

retina

c57bl6/j

retina tissue-wt3

SRR3957213

WT Mouse retina bio replicate 2-tech replicate 2

retina

c57bl6/j

retina tissue-wt1

SRR3957215

WT Mouse retina bio replicate 3-tech replicate 2

retina

c57bl6/j

retina tissue-wt3

SRR3957217

RHO KO Mouse eye bio replicate 2

whole eye

c57bl6/j rho ko

eye tissue-rho ko2

SRR3957211

WT Mouse retina bio replicate 1-tech replicate 2

retina

c57bl6/j

retina tissue-wt2

SRR3957214

WT Mouse retina bio replicate 3-tech replicate 1

retina

c57bl6/j

retina tissue-wt2

SRR3957216

RHO KO Mouse eye bio replicate 1

whole eye

c57bl6/j rho ko

eye tissue-rho ko1

SRR3957218

RHO KO Mouse eye bioreplicate 3

whole eye

c57bl6/j rho ko

eye tissue-rho ko3