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Accession IconGSE79383

A microfluidics-based in vitro model of the gastrointestinal human-microbe interface

Organism Icon Homo sapiens
Sample Icon 18 Downloadable Samples
Technology Badge Icon Affymetrix Human Transcriptome Array 2.0 (hta20)

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Description
We have developed a microfluidics-based in vitro model of the human gut allowing co-culture of human and microbial cells and subsequent multi-omic assessment of the effect of the co-culture on the host transcriptome.
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18
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GSM2094167
Caco-2 human epithelial colorectal adenocarcinoma cells, mRNA, anaerobic control, rep2
caco-2 human epithelial colorectal adenocarcinoma cells
control
GSM2094170
Caco-2 human epithelial colorectal adenocarcinoma cells, mRNA, anaerobic co-culture (LGG), rep2
caco-2 human epithelial colorectal adenocarcinoma cells
co-culture (lgg)
GSM2094172
Caco-2 human epithelial colorectal adenocarcinoma cells, mRNA, anaerobic co-culture (LGG+B.caccae), rep1
caco-2 human epithelial colorectal adenocarcinoma cells
co-culture (lgg+b.caccae)
GSM2094171
Caco-2 human epithelial colorectal adenocarcinoma cells, mRNA, anaerobic co-culture (LGG), rep3
caco-2 human epithelial colorectal adenocarcinoma cells
co-culture (lgg)
GSM2094179
Caco-2 human epithelial colorectal adenocarcinoma cells, miRNA, anaerobic co-culture (LGG), rep2
caco-2 human epithelial colorectal adenocarcinoma cells
co-culture (lgg)
GSM2094176
Caco-2 human epithelial colorectal adenocarcinoma cells, miRNA, anaerobic control, rep2
caco-2 human epithelial colorectal adenocarcinoma cells
control
GSM2094173
Caco-2 human epithelial colorectal adenocarcinoma cells, mRNA, anaerobic co-culture (LGG+B.caccae), rep2
caco-2 human epithelial colorectal adenocarcinoma cells
co-culture (lgg+b.caccae)
GSM2094166
Caco-2 human epithelial colorectal adenocarcinoma cells, mRNA, anaerobic control, rep1
caco-2 human epithelial colorectal adenocarcinoma cells
control
GSM2094169
Caco-2 human epithelial colorectal adenocarcinoma cells, mRNA, anaerobic co-culture (LGG), rep1
caco-2 human epithelial colorectal adenocarcinoma cells
co-culture (lgg)
GSM2094174
Caco-2 human epithelial colorectal adenocarcinoma cells, mRNA, anaerobic co-culture (LGG+B.caccae), rep3
caco-2 human epithelial colorectal adenocarcinoma cells
co-culture (lgg+b.caccae)
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