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Accession IconGSE15221

Malaria primes the innate immune response due to IFNg induced enhancement of Toll-like receptor expression and function.

Organism Icon Homo sapiens
Sample Icon 28 Downloadable Samples
Technology Badge IconIllumina human-6 v2.0 expression beadchip

Submitter Supplied Information

Description
Patients with febrile malaria were recruited in order to determine Peripheral Blood Mononuclear Cell (PBMC) gene expression during malaria. Blood was harvested from patients during the acute phase of the illness, and then patients were given a curative regimen of antimalarials. Three to four weeks after treatment, patients returned to the malaria clinic and blood was collected again, in order that each patient could serve as his or her own control. PBMC were isolated at the time of blood collection and forzen in RNA extraction buffer. At the end of the study, each patient was arrayed for ~47,000 transcripts, comparing gene expression at the end of therapy to that at the beginning. The goal was to determine which genes were altered as a result of disease at least 2 fold in a statistically significant manner and to assess if the genes involved could be related to Toll-like receptor signaling pathways. Approximately 60 genes involved in inflammation were confirmed by qPCR.
PubMed ID
Total Samples
28
Submitter’s Institution

Samples

Show of 28 Total Samples
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PBMCs_cured_no_symptoms_patient_12
male
68.000
PBMCs_with_malaria_symptoms_patient_05
female
35.000
PBMCs_with_malaria_symptoms_patient_12
male
68.000
PBMCs_cured_no_symptoms_patient_02
male
46.000
PBMCs_cured_no_symptoms_patient_10
male
31.000
PBMCs_with_malaria_symptoms_patient_02
male
46.000
PBMCs_cured_no_symptoms_patient_13
male
32.000
PBMCs_with_malaria_symptoms_patient_06
male
30.000
PBMCs_with_malaria_symptoms_patient_07
male
42.000
PBMCs_with_malaria_symptoms_patient_11
male
47.000
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